Eye Discs ATAC-Seq Track Settings
 
ATAC-Seq of D. ananassae Eye Discs   (All Expression and Regulation tracks)

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 Eye Discs IDR  IDR Peaks for D. ananassae Eye-antennal Discs   Schema 
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 Eye Discs MACS  MACS2 Peaks for D. ananassae Eye-antennal Discs   Schema 
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 Eye Discs logLR  Log Likelihood Enrichment for D. ananassae Eye-antennal Discs   Schema 

Description

These tracks show the results from Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq) of D. ananassae eye-antennal discs from third instar larvae. The peak calls and the log likelihood ratio evidence tracks were produced by MACS. The Irreproducible Discovery Rate (IDR) peak calls were produced by the idr program using a global IDR threshold of 0.05.

Accession Numbers for ATAC-Seq Data

The ATAC-Seq data were obtained from NCBI using the following accession numbers:

References

Jacobs J, et al. The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes. Nat Genet. 2018 Jul;50(7):1011-1020.

Zhang Y, et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9(9):R137.