UCSC Genome Browser on D. ananassae Sep. 2021 (University of Maryland, ASM1763931v2/DanaRefSeq2)
move zoom in zoom out
NW_025319045:140,000-200,000 60,001 bp.
move start
  Click on a feature for details. Click+shift+drag to zoom in. Click side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. Press "?" for keyboard shortcuts.   move end
  
Use drop-down controls below and press refresh to alter tracks displayed.
Tracks with lots of items will automatically be displayed in more compact modes.
-   Mapping and Sequencing Tracks
Base Position
Gap
GC Percent
Assembly
CpG Islands
INSDC
RefSeq Acc
Restr Enzymes
Short Match
-   Genes and Gene Prediction Tracks
RefSeq Genes
D. mel Transcripts
D. mel Proteins
genBlastG Genes
GeMoMa Genes
Drosophila RefSeq Transcripts
Potential Frame Shifts
CDS Mapping
Genscan Genes
Geneid Genes
N-SCAN
N-SCAN PASA-EST
Augustus
Augustus (Protein Hints)
GlimmerHMM
tRNA Genes
rRNA Genes
Pfam Conserved Domains
-   Expression and Regulation
Combined RAMPAGE TSS
RAMPAGE TSS Read Density
Combined CSHL RAMPAGE TSS
CSHL RAMPAGE TSS Read Density
CSHL RAMPAGE Alignments
Eye Discs ATAC-Seq
-   RNA-Seq Tracks
Combined Splice Junctions
RNA-Seq Coverage (Stages)
RNA-Seq Coverage (Tissues)
TransDecoder Transcripts
Trinity Transcripts
-   PacBio Iso-Seq Tracks
FLNC Iso-Seq Reads
Clustered Iso-Seq Reads
Collapsed Iso-Seq Transcripts
SQANTI3 QC Transcripts
SQANTI3 Filtered Transcripts
uLTRA FLNC Iso-Seq Reads
uLTRA Collapsed Iso-Seq Transcripts
TAMA Collapsed Transcripts
StringTie2 Iso-Seq Transcripts
Scallop-LR Iso-Seq Transcripts
TransDecoder Iso-Seq Transcripts
-   Comparative Genomics
D. melanogaster Chain
D. melanogaster Net
D. ananassae DanaCAF1 Chain
D. ananassae DanaCAF1 Net
-   Variation and Repeats
Interrupted Rpts
Microsatellite
Simple Repeats
WM + SDust
RepeatMasker
TE Density
TANTAN
TANTAN Tandem
RepeatModeler
TransposonPSI (Pfam)
Invisible link